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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800646.1_cds_XP_016470909.1_6288
CDS Infomation

[gene=LOC107793133] [db_xref=GeneID:107793133] [protein=laccase-17-like] [protein_id=XP_016470909.1] [location=join(3855..3974,4084..4235,4617..4861,4975..5103,5338..6306,6420..6550)] [gbkey=CDS]
Sequence

ATGGGTTTTTCTAGTACTTTTCCATCATTAGTTCCTATGGCAATGTTCATTATTGCTTTT
CTGGCATTGTGTCTCATGCCTCAGCCTGCACTAGCCATCACCAGACACTATGAGTTCAAT
ATAACAATGGCAAATGTCACTAGATTGTGCCATACTAAGAGCATAGTGACGGTTAATGGA
AAATTCCCAGGGCCTCGTATTGTGACAAGGGAGGGTGATCGTCTACTTATAAAAGTCAAT
AACCATGTTCCTAACAATATTTCTATTCACTGGCATGGAGTGAGACAGCTTCGTAGTGGA
TGGGCAGATGGTCCTGCATATATAACACAATGCCCCATTCAAACAGGCCAAAGTTATGTA
TATAATTACACAATTGTTGGTCAAAGAGGGACTTTGTGGTGGCATGCCCATATTTCATGG
CTAAGATCTACTCTTTATGGCCCTCTAATTATCCTTCCTAAGAAAAATGAATCCTACCCT
TTTCTCAAACCATTCAAGGAAGTTCCAATCATCTTAGGAGAATGGTTCAATGCTGATCCT
GAAGCCATTATTAGCCAAGCTCTACAAACTGGTGGAGGTCCAAATGTCTCTGATGCTTAC
ACCATTAATGGCCTTCCGGGGCTCTTGTACAACTGCTCTGCAAAAGATACATTCAAGCTA
AAGGTCAAGCTAGGAAAGACATACCTTTTCCGTATGATCAATGCTGCACTCAATGACGAG
CTTTTCTTCAGCATTGCAAATCACACACTCACAGTAGTCGATGCTGATGCAGTATATGTT
AAACCTTTTGAGACTAACACAATACTTATAACACCAGGACAGACAACAAATGTCCTTTTG
AAAACCAAATCTGAATACCCTAGTGCCACTTTTCTCATGACTGCTAGACCTTATGTTACT
GGCCAAGGCACTTTTGACAACTCCACTGTTGCGGGAATTCTTGAATATGAATCCCCAATT
TCTCATTCAACCAAATCAATGAAGAAACTTCCCATGTTCATGCCTACTTTACCTCCTCTA
AATGACACTTCATTTGCTACCAATTTTAGCAAGAAACTCCGTAGTTTAGCAACTTCTCAA
TTTCCTACTAAAGTCCCTCAAAATGTTGACAAGCATTTCTTTTTTACAGTAGGCCTTGGC
ACAACTCCTTGTGACAAAAATCAAACTTGTCAAGGTCCTACTAATACAACCAAATTTGCA
GCGTCAATTAATAACATATCATTTGTACAACCTACAACTGCACTGCTCCAATCTCATTTC
ATTGGACAATCAAATGGTGTTTATAGCCCTTATTTCCCTAATAATCCTTTGAATTGGTTC
AATTATACCGGGAATCCTCCAAATAACACAATGGTTAGCAATGGTACTAAAGTTTTGGTA
CTTCCTTTTAATACAAGTGTTGAGCTTATTATGCAAGATACAAGCATTCTTGGTGCTGAA
AGCCATCCACTTCATCTTCACGGCTTCAATTTCTTTGTCGTTGGTCAAGGTTTTGGTAAT
TTTGACCCTAATAAGGATCCTGCTAACTTCAATCTCATTGACCCTGTTGAGAGGAACACA
GTAGGTGTGCCATCTGGTGGATGGGTCGCTATTCGATTTTTAGCTGATAATCCAGGTGTT
TGGTTCATGCATTGTCACTTGGAAGTGCATACAAGTTGGGGATTGAAAATGGCATGGCTT
GTCTTAGATGGAAAACTTCCCAATCAGAAGCTCCTTCCTCCTCCTTCTGATCTCCCAAAA
TGCTGA

Peptide Sequence

PEP ID

XP_016470909.1
PEP Infomation

PREDICTED: laccase-17-like [Nicotiana tabacum]
Sequence

MGFSSTFPSLVPMAMFIIAFLALCLMPQPALAITRHYEFNITMANVTRLCHTKSIVTVNG
KFPGPRIVTREGDRLLIKVNNHVPNNISIHWHGVRQLRSGWADGPAYITQCPIQTGQSYV
YNYTIVGQRGTLWWHAHISWLRSTLYGPLIILPKKNESYPFLKPFKEVPIILGEWFNADP
EAIISQALQTGGGPNVSDAYTINGLPGLLYNCSAKDTFKLKVKLGKTYLFRMINAALNDE
LFFSIANHTLTVVDADAVYVKPFETNTILITPGQTTNVLLKTKSEYPSATFLMTARPYVT
GQGTFDNSTVAGILEYESPISHSTKSMKKLPMFMPTLPPLNDTSFATNFSKKLRSLATSQ
FPTKVPQNVDKHFFFTVGLGTTPCDKNQTCQGPTNTTKFAASINNISFVQPTTALLQSHF
IGQSNGVYSPYFPNNPLNWFNYTGNPPNNTMVSNGTKVLVLPFNTSVELIMQDTSILGAE
SHPLHLHGFNFFVVGQGFGNFDPNKDPANFNLIDPVERNTVGVPSGGWVAIRFLADNPGV
WFMHCHLEVHTSWGLKMAWLVLDGKLPNQKLLPPPSDLPKC

Transcript Sequence

Gene sequence data has not been registered.